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Analytical Chemistry

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https://www.readbyqxmd.com/read/28345880/detecting-proteins-glycosylation-by-a-homogeneous-reaction-system-with-zwitterionic-gold-nanoclusters
#1
Jinan Li, Jing Liu, Zheyi Liu, Yuan Tan, Xiaoyan Liu, Fangjun Wang
Homogeneous gold nanoclusters (Au NCs) have been widely utilized in drug delivery, chemical sensing, bioassays and bio-labeling due to their unique physical and chemical properties. However, little attention has been paid to their application in detecting protein post-translational modifications. Herein, we describe development of a homogeneous reaction system with water-soluble zwitterionic Au NCs to capture glycopeptides from complex biological samples. The unique characteristics of Au NCs, such as their molecular-like properties, the excellent homogeneity in aqueous solution, the organic solvent respon-sive precipitation, and the easy preparation in only 4...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345878/multispectral-optical-tweezers-for-biochemical-fingerprinting-of-cd9-positive-exosome-subpopulations
#2
Randy P Carney, Sidhartha Hazari, Macalistair Colquhoun, Di Tran, Billanna Hwang, Michael S Mulligan, James D Bryers, Eugenia Girda, Gary S Leiserowitz, Zachary James Smith, Kit S Lam
Extracellular vesicles (EVs), including exosomes, are circulating nanoscale particles heavily implicated in cell signaling, and can be isolated in vast numbers from human biofluids. Study of their molecular profiling and materials properties is currently underway for purposes of describing a variety of biological functions and diseases. However, the large, and as yet unquantified, variety of EV subpopulations differing in composition, size, and likely function, necessitates characterization schemes capable of measuring single vesicles...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345877/direct-analysis-of-metal-ions-in-solutions-with-high-salt-concentrations-by-total-reflection-x-ray-fluorescence-txrf
#3
Mercedes Regadío, Sofía Riaño, Koen Binnemans, Tom Vander Hoogerstraete
Total Reflection X-ray Fluorescence (TXRF) is becoming more and more popular for elemental analysis in academia and industry. However, simplification of the procedures for analyzing samples with complex compositions and residual matrix effects is still needed. In this work, the effect of an inorganic (CaCl2) and an organic (tetraalkylphosphonium chloride) matrix on metals quantification by TXRF was investigated for liquid samples. The samples were spiked with up to 20 metals at concentrations ranging from 3 to 50 mg L-1 per element, including elements with spectral peaks near the peaks of the matrix elements or near the Raleigh and Compton scattering peaks of the X-ray source (molybdenum anode)...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345870/ultra-fast-separation-and-analysis-of-monoclonal-antibody-aggregates-using-membrane-chromatography
#4
Pedram Madadkar, Umatheny Umatheva, Geoff Hale, Yves Durocher, Raja Ghosh
We discuss a method for rapid and cost-effective analysis of monoclonal antibody (mAb) aggregates. Hydrophobic interaction membrane chromatography, which was previously shown to be highly suitable for such separation and analysis, was used in a recently developed format referred to as laterally-fed membrane chromatography (or LFMC). A stack of rectangular polyvinylidene fluoride (or PVDF) membranes having 0.22 µm pores housed within a modified analytical-scale LFMC device was used for analyzing aggregate types and content in different monoclonal antibody samples...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345869/characterization-of-the-aerosol-based-synthesis-of-uranium-particles-as-a-potential-reference-material-for-micro-analytical-methods
#5
Ronald Middendorp, Martin Dürr, Alexander Knott, Fabien Pointurier, Dario Ferreira Sanchez, Valerie Ann Samson, Daniel Grolimund
A process for production of micrometer-sized particles composed of uranium oxide using aerosol spray pyrolysis is characterized with respect to the various production parameters. The aerosol is generated using a vibrating orifice aerosol generator providing monodisperse droplets, which are oxidized in a subsequent heat treatment. The final particles are characterized with micro analytical methods to determine size, shape, internal morphology, chemical and structural properties in order to assess the suitability of the produced particles as a reference material for micro analytical methods, in particular for mass-spectrometry...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345867/correction-to-recent-advances-in-the-analysis-of-single-cells
#6
Lucas Armbrecht, Petra S Dittrich
No abstract text is available yet for this article.
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345865/human-milk-oligosaccharide-specificities-of-human-galectins-comparison-of-electrospray-ionization-mass-spectrometry-and-glycan-microarray-screening-results
#7
Km Shams-Ud-Doha, Elena N Kitova, Pavel I Kitov, Yves St-Pierre, John S Klassen
The affinities of thirty-two free human milk oligosaccharides (HMOs) for four human galectin proteins - a stable mutant of hGal1 (hGal-1), a C-terminal fragment of hGal-3 (hGal-3C), hGal-7 and an N-terminal fragment of hGal-9 (hGal-9N) - were measured using electrospray ionization mass spectrometry (ESI-MS). The binding data show that each of the four galectins recognize the majority of the HMOs tested (hGal-1 binds thirty-two HMOs, hGal-3C binds twenty-six, hGal-7 binds thirty-one and hGal-9N binds twenty-six)...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345864/triple-stage-mass-spectrometry-unravels-the-heterogeneity-of-an-endogenous-protein-complex
#8
Gili Ben-Nissan, Mikhail E Belov, David Morgenstern, Yishai Levin, Orly Dym, Galina Arkind, Carni Lipson, Alexander A Makarov, Michal Sharon
The way we perceive protein complexes is changing. What were once thought to be uniform entities may actually represent an ensemble of different assemblies with distinct functions and regulation. This increased complexity is enabled by the variety of protein diversification mechanisms that exist at every step of the protein biosynthesis pathway, such as alternative splicing and post transcriptional and translational modifications. The resulting variation in subunits can generate compositionally distinct protein assemblies...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345863/native-mass-spectrometry-of-recombinant-proteins-from-crude-cell-lysates
#9
Jinrui Gan, Gili Ben-Nissan, Galina Arkind, Mark Tarnavsky, Devin Trudeau, Lianet Noda Garcia, Dan Tawfik, Michal Sharon
Determining the properties of proteins prior to purification saves time and labor. Here, we demonstrate a native mass spectrometry approach for rapid characterization of overexpressed proteins directly in crude cell lysates. The method provides immediate information on the identity, solubility, oligomeric state, overall structure and stability, as well as ligand binding, without the need for purification.
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345862/quantification-of-lipid-metabolism-in-living-cells-through-the-dynamics-of-lipid-droplets-measured-by-stimulated-raman-scattering-imaging
#10
Chi Zhang, Junjie Li, Lu Lan, Ji-Xin Cheng
Dysregulation of lipid metabolism is associated with many diseases including cancer. Lipid droplet (LD), a ubiquitous organelle in mammalian cells, serves as a hub for lipid metabolism. Conventional assays on the measurement of lipid metabolism rely on the quantification of the lipid composition or amount. Such methods cannot distinguish LDs having different bio-functionalities in living cells, and thus could be inaccurate in measuring the instantaneous lipogenesis of the living cells. We applied label-free stimulated Raman scattering microscopy to quantify the LDs' spatial-temporal dynamics, which showed direct links to cellular lipid metabolisms and can separate LDs involving in different metabolic events...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345860/an-instant-visual-and-instrument-free-method-for-on-site-screening-of-gts-40-3-2-soybean-based-on-body-heat-triggered-recombinase-polymerase-amplification
#11
Rui Wang, Fang Zhang, Liu Wang, Wenjuan Qian, Cheng Qian, Jian Wu, Yi-Bin Ying
On-site monitoring the plantation of genetically modified (GM) crops is of critical importance in agriculture industry throughout the world. In this paper, a simple, visual and instrument-free method for instant on-site detection of GTS 40-3-2 soybean has been developed. It is based on body-heat recombinase polymerase amplification (RPA) and followed with naked-eye detection via fluorescent DNA dye. Combining with extremely simplified sample preparation, the whole detection process can be accomplished within 10 min and the fluorescent results can be photographed by accompanied smart phone...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28345351/shape-memory-characteristics-of-o157-antigenic-cavities-generated-on-nanocomposites-consisting-of-copolymer-encapsulated-gold-nanoparticles
#12
Takamasa Kinoshita, Dung Quang Nguyen, Dung Quynh Le, Kengo Ishiki, Hiroshi Shiigi, Tsutomu Nagaoka
Nanometer-sized composite particles, which consisted of gold nanoparticles encapsulated by an N-isopropylacrylamide copolymer, were successfully synthesized using a one-step process. Shape complementary cavities of the O157-antigen were formed on the composite utilizing temperature-dependent affinity changes of the copolymer. The composite bound to enterohemorrhagic Escherichia coli (E. coli) O157 at 298 K and enhanced light-scattering intensity of the cell due to the optical properties of the gold nanoparticles...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28343380/ratiometric-visualization-of-no-h2s-cross-talk-in-living-cells-and-tissues-using-a-nitroxyl-responsive-two-photon-fluorescence-probe
#13
Yibo Zhou, Xiufang Zhang, Sheng Yang, Yuan Li, Zhihe Qing, Jing Zheng, Jishan Li, Ronghua Yang
It is of scientific significance to explore the intricate relationship between two crucial gasotransmitters nitric oxide (NO) and hydrogen sulfide (H2S), because they exert similar and interdependent biological actions within the living organisms. Nevertheless, visualization of the NO/H2S crosstalk using effective molecular imaging tools remains challenging. To address this issue, and given that nitroxyl (HNO) has been implicated as the interdependent production of NO and H2S via a network of cascading chemical reactions, we herein design a ratiometric two-photon fluorescent probe for HNO, termed TP-Rho-HNO, which consists of benzo[h]chromene-rhodol scaffold as two-photon energy transfer cassette with phosphine moiety as specific HNO recognition unit...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28287715/dual-recognition-f%C3%A3-rster-resonance-energy-transfer-based-platform-for-one-step-sensitive-detection-of-pathogenic-bacteria-using-fluorescent-vancomycin-gold-nanoclusters-and-aptamer-gold-nanoparticles
#14
Mengqun Yu, Hong Wang, Fei Fu, Linyao Li, Jing Li, Gan Li, Yang Song, Mark T Swihart, Erqun Song
The effective monitoring, identification, and quantification of pathogenic bacteria is essential for addressing serious public health issues. In this study, we present a universal and facile one-step strategy for sensitive and selective detection of pathogenic bacteria using a dual-molecular affinity-based Förster (fluorescence) resonance energy transfer (FRET) platform based on the recognition of bacterial cell walls by antibiotic and aptamer molecules, respectively. As a proof of concept, Vancomycin (Van) and a nucleic acid aptamer were employed in a model dual-recognition scheme for detecting Staphylococcus aureus (Staph...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28225587/compms2miner-an-automatable-metabolite-identification-visualization-and-data-sharing-r-package-for-high-resolution-lc-ms-data-sets
#15
William M B Edmands, Lauren Petrick, Dinesh K Barupal, Augustin Scalbert, Mark J Wilson, Jeffrey K Wickliffe, Stephen M Rappaport
A long-standing challenge of untargeted metabolomic profiling by ultrahigh-performance liquid chromatography-high-resolution mass spectrometry (UHPLC-HRMS) is efficient transition from unknown mass spectral features to confident metabolite annotations. The compMS(2)Miner (Comprehensive MS(2) Miner) package was developed in the R language to facilitate rapid, comprehensive feature annotation using a peak-picker-output and MS(2) data files as inputs. The number of MS(2) spectra that can be collected during a metabolomic profiling experiment far outweigh the amount of time required for pain-staking manual interpretation; therefore, a degree of software workflow autonomy is required for broad-scale metabolite annotation...
March 27, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28343385/development-of-a-rapid-lc-ms-ms-method-for-the-quantification-of-cannabidiol-cannabidivarin-%C3%AE-9-tetrahydrocannabivarin-and-cannabigerol-in-mouse-peripheral-tissues
#16
Fabiana Piscitelli, Ester Pagano, Anna Lauritano, Angelo A Izzo, Vincenzo Di Marzo
Cannabis has been known as a medicine for several thousand years across many cultures and its beneficial effects are due to the presence of cannabinoids, unique natural products, whose pharmacology is going to gain increasing interest in scientific community. The discovery of the main psychoactive constituent of Cannabis sativa L., Δ9-tetrahydrocannabinol (Δ9-THC), has led to the identification of at least one hundred additional phytocannabinoids, including cannabidiol (CBD), cannabidivarin (CBDV), Δ9-tetrahydrocannabivarin (Δ9-THCV) and cannabigerol (CBG)...
March 26, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28339187/accurate-mirna-analysis-in-crude-cell-lysate-by-capillary-electrophoresis-based-hybridization-assay-in-comparison-with-quantitative-reverse-transcription-polymerase-chain-reaction
#17
Liang Hu, Alexander S Stasheuski, David W Wegman, Nan Wu, Burton B Yang, Heyam Hayder, Chun Peng, Stanley K Liu, George M Yousef, Sergey N Krylov
Accurate quantitation of microRNA (miRNA) in tissue samples is required for validation and clinical use of miRNA-based disease biomarkers. Since sample processing, such as RNA extraction, introduces undesirable biases, it is advantageous to measure miRNA in a crude cell lysate. Here we report on accurate miRNA quantitation in crude cell lysate by a CE-based hybridization assay termed direct quantitative analysis of multiple miRNAs (DQAMmiR). Accuracy and precision of miRNA quantitation were determined for miRNA samples in a crude cell lysate, RNA extract from the lysate, and a pure buffer...
March 24, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28337919/new-insights-towards-efficient-charge-separation-mechanism-for-high-performances-photoelectrochemical-aptasensing-enhanced-charge-carriers-lifetime-via-coupling-ultrathin-mos2-nanoplates-with-nitrogen-doped-graphene-quantum-dots
#18
Ding Jiang, Xiaojiao Du, Lei Zhou, Henan Li, Kun Wang
Deeply understanding the internal mechanism of photoelectrohemical (PEC) process is conducive to fabricate high-performances PEC biosensors. In this work, we proposed a new insight towards efficient charge separation mechanism in high-performances PEC biosensors. Specifically, we disclosed that the lifetimes of photogenerated charge carriers of ultrathin MoS2 nanosheets could be prolonged by approximately millisecond timescales after a proper mole ratio of NGQDs were coupled, leading to the promoted charge separation, and giant photocurrent signal-magnify...
March 24, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28337917/micrometer-precise-determination-of-the-thin-electrolyte-layer-of-a-spectroelectrochemical-cell-by-microelectrode-approach-curves
#19
Dennis Hiltrop, Justus Masa, Alexander J R Botz, Armin Lindner, Wolfgang Schuhmann, Martin Muhler
A spectroelectrochemical cell is presented that allows investigations of electrochemical reactions by means of attenuated total reflection infrared (ATR-IR) spectroscopy. The electrode holder for the working (WE), counter and reference electrode as mounted in the IR spectrometer cause the formation of a thin electrolyte layer between the internal reflection element (IRE) and the surface of the WE. The thickness of this thin electrolyte layer (dTL) was estimated by performing a scanning electrochemical microscopy-(SECM) like approach of a Pt microelectrode (ME), which was leveled with the WE towards the IRE surface...
March 24, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28337914/electrically-actuated-valves-for-woven-fabric-lateral-flow-devices
#20
Tanya Narahari, Dhananjaya Dendukuri, Shashi K Murthy
The integration of flow control elements into low-cost biosensors, presents a significant engineering challenge. This article describes the development and integration of active, chemical valves into lateral flow devices, using a scalable, single-step, weaving-based manufacturing approach. The valve was constructed from an electrically conductive polymer, polypyrrole. The polymer switches between wetting and non-wetting states when it is reduced and oxidized via the application of an electrochemical potential...
March 24, 2017: Analytical Chemistry
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